Resolving the intertwining of inflammation and fibrosis in human heart failure at single-cell level
we performed single cell RNA sequencing (scRNA-seq) in both normal and failed human heart. CD45- cells in the myocardium and immune cells (CD45+ cells) were isolated from myocardium and corresponding peripheral blood were sorted for scRNA-seq. Our findings were also validated with bulk RNAseq. Overall design: Establishing a comprehensive cell atlas of immune cells in human heart failure at single cell level.
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Atlas
Analysis Portals
NoneProject Label
scRNAseqOfFailingHumanHeartSpecies
Homo sapiens
Sample Type
specimens
Anatomical Entity
Organ Part
Selected Cell Types
Unspecified
Disease Status (Specimen)
Disease Status (Donor)
Development Stage
human adult stage
Library Construction Method
10x 3' transcription profiling
Nucleic Acid Source
single cell
Paired End
falseAnalysis Protocol
analysis_protocol_1File Format
Cell Count Estimate
200.6kDonor Count
6