Transcriptomic Profiling of the Developing Cardiac Conduction System at Single-Cell Resolution.
The cardiac conduction system (CCS) consists of distinct components including the sinoatrial node (SAN), atrioventricular node (AVN), His bundle, bundle branches (BB) and Purkinje fibers (PF). Despite an essential role for the CCS in heart development and function, the CCS has remained challenging to interrogate due to inherent obstacles including small cell numbers, large cell type heterogeneity, complex anatomy and difficulty in isolation. We used single-cell RNA-sequencing (scRNA-seq) to perform genome-wide analysis of gene expression of the CCS at single-cell resolution. Overall design: Single cell transcriptional analysis of embryonic cardiac cells using 10x genomics 3' solution.
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Atlas
Analysis Portals
NoneProject Label
DevelopingCardiacSystemSpecies
Mus musculus
Sample Type
specimens
Anatomical Entity
heart
Organ Part
Selected Cell Types
Unspecified
Disease Status (Specimen)
normal
Disease Status (Donor)
normal
Development Stage
Theiler stage 24
Library Construction Method
10x 3' v2
Nucleic Acid Source
single cell
Paired End
falseAnalysis Protocol
optimus_post_processing_v1.0.0, optimus_v4.2.2File Format
Cell Count Estimate
22.0kDonor Count
6