HCA Data Explorer

Mural cell composition and functional analysis in the healing process of human gingiva from periodontal intrabony defects

Access Granted
Updated October 31, 2024

Objective: To evaluate the composition and function of mural cell populations in human gingival tissues. Design: A cross-sectional study was conducted on seven periodontitis (stage Ⅲ) patients. Gingival tissues were collected two months after scaling and root planing and divided into 3 groups: 1, h_h group (horizontal bone resorption, residual pocket depth ≤3 mm); 2, v_h group (vertical bone resorption >4 mm, residual pocket depth ≤3 mm); 3, v_i group (vertical bone resorption >4 mm, residual pocket depth ≥6 mm). Single-cell RNA sequencing (10X genomics) and subsequent bioinformatics analysis were performed. Protein expression of selected genes was confirmed by histological staining. Results: Two mural cell clusters, RGS5+THY1+ and ACTA2+MYH11+ subpopulations, were identified and confirmed by histological staining and cross-validation with three different single-cell RNA sequencing datasets in the GEO database. RGS5+THY1+ cluster in perivascular areas possessed cellular protrusions and exhibited immunomodulatory and synthetic phenotypes. In contrast, the ACTA2+MYH11+ cluster strictly distributed around vessel walls was characterized by a contractile phenotype. Mural cells closely interacted with endothelial cells through PDGF and NOTCH3 signaling. Mural cell loss was detected in the v_i group and in hopeless periodontal teeth, which might be caused by tumor necrosis factor-alpha induced apoptosis. Conclusions: Gingival mural cells can be classified into two distinct clusters according to their gene signatures and cell morphology. The loss of mural cells may indicate periodontitis progression.

Wenjun ZhuSun Yat-Sen Universityzhuwj9@mail.sysu.edu.cn
Wenjun Zhu1
Xin Huang1
Arsenios Chatzigeorgiou2
1Sun Yat-Sen University
2EMBL-EBI
None

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/2433c1e4-5a12-46a5-b2d5-d3554a7694f2
None
GEO Series Accessions:INSDC Project Accessions:INSDC Study Accessions:

Atlas

None

Analysis Portals

None

Project Label

MuralGingivaZhu

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

mouth

Organ Part

gingiva

Selected Cell Types

Unspecified

Disease Status (Specimen)

periodontitis

Disease Status (Donor)

periodontitis

Development Stage

human adult stage

Library Construction Method

10x 3' v3

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

raw_matrix_generation

File Format

4 file formats

Cell Count Estimate

33.5k

Donor Count

1
fastq.gz9 file(s)mtx.gz3 file(s)tsv.gz6 file(s)xlsx1 file(s)