Single-cell RNA sequencing of human kidney
A comprehensive cellular anatomy of normal human kidney is vital to address the cellular origins of renal disease and renal cancer. Some kidney diseases may be cell type-specific, especially renal tubular cells. To investigate the classification and transcriptomic information of human kidney, we performed a method to obtain single-cell suspension of kidney rapidly, and conducted single-cell RNA sequencing (scRNA-seq). We present scRNA-seq data of 22,808 high quality cells from human kidneys of 3 donors. In this dataset, we show 13 clusters of normal human renal cells. Due to the high quality of single cell transcriptomic information, proximal tubule (PT) cells were classified into 6 subtypes and collecting ducts cells into 2 subtypes. Collectively, our data will provide a reliable reference for the studies of renal cell biology and kidney diseases.
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Atlas
Analysis Portals
NoneProject Label
HumanAdultKidneyLiaoMoSpecies
Homo sapiens
Sample Type
specimens
Anatomical Entity
kidney
Organ Part
Unspecified
Selected Cell Types
Unspecified
Disease Status (Specimen)
normal
Disease Status (Donor)
Development Stage
human adult stage
Library Construction Method
10x 3' v2
Nucleic Acid Source
single cell
Paired End
falseAnalysis Protocol
raw_matrix_generationFile Format
Cell Count Estimate
23.4kDonor Count
3