Human distal airways contain a multipotent secretory cell that can regenerate alveoli

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Updated October 18, 2024

The human lung differs substantially from its mouse counterpart, resulting in a distinct distal airway architecture affected by disease pathology in chronic obstructive pulmonary disease. In humans, the distal branches of the airway interweave with the alveolar gas-exchange niche, forming an anatomical structure known as the respiratory bronchioles. Owing to the lack of a counterpart in mouse, the cellular and molecular mechanisms that govern respiratory bronchioles in the human lung remain uncharacterized. Here we show that human respiratory bronchioles contain a unique secretory cell population that is distinct from cells in larger proximal airways. Organoid modelling reveals that these respiratory airway secretory (RAS) cells act as unidirectional progenitors for alveolar type 2 cells, which are essential for maintaining and regenerating the alveolar niche. RAS cell lineage differentiation into alveolar type 2 cells is regulated by Notch and Wnt signalling. In chronic obstructive pulmonary disease, RAS cells are altered transcriptionally, corresponding to abnormal alveolar type 2 cell states, which are associated with smoking exposure in both humans and ferrets. These data identify a distinct progenitor in a region of the human lung that is not found in mouse that has a critical role in maintaining the gas-exchange compartment and is altered in chronic lung disease.

Edward E MorriseyUniversity of Pennsylvaniaemorrise@pennmedicine.upenn.edu
Maria C Basil1
Fabian L Cardenas-Diaz1
Jaymin J Kathiriya2
Michael P Morley1
Justine Carl1
Alexis N Brumwell2
Jeremy Katzen1
Katherine J Slovik1
Apoorva Babu1
Su Zhou1
Madison M Kremp1
Katherine B McCauley3
Shanru Li1
Joseph D Planer1
Shah S Hussain4
Xiaoming Liu5
Rebecca Windmueller1
Yun Ying1
Kathleen M Stewart1
Michelle Oyster1
Jason D Christie1
Joshua M Diamond1
John F Engelhardt5
Edward Cantu1
Steven M Rowe4
Darrell N Kotton3
Harold A Chapman2
Edward E Morrisey1
1University of Pennsylvania
2University of California, San Francisco
3Center for Regenerative Medicine, Boston University and Boston Medical Center
4Gregory Fleming James Cystic Fibrosis Research Center, University of Alabama
5University of Iowa
Ida Zucchi

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/5f1a1aee-6c48-4dd4-a2c4-eb4ca6aadf74

Supplementary links are provided by contributors and represent items such as additional data which can’t be hosted here; code that was used to analyze this data; or tools and visualizations associated with this specific dataset.

1.http://ec2-3-236-59-0.compute-1.amazonaws.com:3838/lungmap/
INSDC Project Accessions:
SRP193092, SRP309154
GEO Series Accessions:
INSDC Study Accessions:

Atlas

LungLung v2.0

Analysis Portals

None

Project Label

MultipotentCellRgenerateAlveoli

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

lung

Organ Part

2 organ parts

Selected Cell Types

type II pneumocyte

Disease Status (Specimen)

2 disease statuses

Disease Status (Donor)

3 disease statuses

Development Stage

human adult stage

Library Construction Method

10x 3' v1

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

raw_matrix_generation

File Format

5 file formats

Cell Count Estimate

899.9k

Donor Count

11
fastq.gz156 file(s)h5.gz19 file(s)mtx.gz1 file(s)tsv.gz2 file(s)xlsx1 file(s)
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