HCA Data Explorer

Targeting the Immune-Fibrosis Axis in Myocardial Infarction and Heart Failure

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Updated July 29, 2024

Cardiac fibrosis is causally linked to heart failure pathogenesis and adverse clinical outcomes. However, the precise fibroblast populations that drive fibrosis in the human heart and the mechanisms that govern their emergence remain incompletely defined. Here, we performed Cellular Indexing of Transcriptomes and Epitomes by sequencing (CITE-seq) in 22 explanted human hearts from healthy donors, acute myocardial infarction (MI), and chronic ischemic and non-ischemic cardiomyopathy patients. We identified a fibroblast trajectory marked by fibroblast activator protein (FAP) and periostin (POSTN) expression that was independent of myofibroblasts, peaked early after MI, remained elevated in chronic heart failure, and displayed a transcriptional signature consistent with fibrotic activity. We assessed the applicability of cardiac fibrosis models and demonstrated that mouse MI, angiotensin II/phenylephrine infusion, and pressure overload models were superior compared to cultured human heart and dermal fibroblasts in recapitulating cardiac fibroblast diversity including pathogenic cell states. Ligand-receptor analysis and spatial transcriptomics predicted interactions between macrophages, T cells, and fibroblasts within spatially defined niches. CCR2 + monocyte and macrophage states were the dominant source of ligands targeting fibroblasts. Inhibition of IL-1β signaling to cardiac fibroblasts was sufficient to suppress fibrosis, emergence, and maturation of FAP + POSTN + fibroblasts. Herein, we identify a human fibroblast trajectory marked by FAP and POSTN expression that is associated with cardiac fibrosis and identify macrophage-fibroblast crosstalk mediated by IL-1β signaling as a key regulator of pathologic fibroblast differentiation and fibrosis.

Kory LavineUniversity of Washingtonklavine@wustl.edu
Junedh Amrute1
Xin Luo2
Vinay Penna1
Andrea Bredemeyer1
Tracy Yamawaki2
Gyu Seong Heo1
Sally Shi2
Andrew Koenig1
Steven Yang1
Farid Kadyrov1
Cameran Jones1
Christoph Kuppe3
Benjamin Kopecky1
Sikander Hayat3
Pan Ma1
Guoshai Feng1
Yuriko Terada1
Angela Fu2
Milena Furtado4
Daniel Kreisel1
Nathan Stitziel1
Chi-Ming Li2
Rafael Kramann3
Yongjian Liu1
Brandon Ason2
Kory Lavine1
1University of Washington
2Amgen Inc.
3RWTH Aachen University
4The Jackson Laboratory
Ida Zucchi

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/660fc8b5-8fb8-4050-8c57-e6313195bc81
None
INSDC Project Accessions:
SRP406759, SRP408806, SRP516110, SRP516314, SRP516372, SRP516583
GEO Series Accessions:INSDC Study Accessions:

Atlas

None

Analysis Portals

None

Project Label

MyocardialInfarctionAmruteCITE

Species

2 species

Sample Type

2 sample types

Anatomical Entity

2 anatomical entities

Organ Part

apical region of left ventricle

Selected Cell Types

Unspecified

Model Organ

2 model organs

Disease Status (Specimen)

9 disease statuses

Disease Status (Donor)

12 disease statuses

Development Stage

3 development stages

Library Construction Method

3 library construction methods

Nucleic Acid Source

2 nucleic acid sources

Paired End

false, true

Analysis Protocol

CITE_raw_matrix_generation, cell_line_raw_matrix_generation, mouse_raw_matrix_generation, multiome_raw_matrix_generation

File Format

6 file formats

Cell Count Estimate

143.8k

Donor Count

57
csv.gz6 file(s)fastq.gz363 file(s)h5.gz23 file(s)mtx.gz88 file(s)tsv.gz199 file(s)xlsx1 file(s)