1.3 Million Brain Cells from E18 Mice
Cortex, hippocampus, and subventricular zone were purchased from BrainBits (C57EHCV). They were from 2 E18 C57BL/6 mice dissected on the same day, shipped overnight on ice, and stored at 4C until being prepared for scRNA-Seq. Brain tissues were dissociated following the Demonstrated Protocol for Mouse Embryonic Neural Tissue (https://support.10xgenomics.com/single-cell/sample-prep/doc/demonstrated-protocol-dissociation-of-mouse-embryonic-neural-tissue-for-single-cell-rna-sequencing). 69 scRNA-Seq libraries were made from first mouse brain 2 days after the dissection. Another 64 scRNA-Seq libraries were made from second mouse brain 6 days after the dissection.
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Atlas
Analysis Portals
Project Label
1M NeuronsSpecies
Mus musculus
Sample Type
specimens
Anatomical Entity
brain
Organ Part
cortex
Selected Cell Types
neuron
Disease Status (Specimen)
normal
Disease Status (Donor)
normal
Development Stage
mouse embryo stage
Library Construction Method
10x 3' v2
Nucleic Acid Source
single cell
Paired End
falseFile Format
Cell Count Estimate
1.3MDonor Count
2