Transcriptomic Mapping of Human Parotid Gland at Single-Cell Resolution
As the largest salivary gland in oral cavity, the parotid gland plays an important role in initial digesting and lubricating food. The abnormal secretory function of the parotid gland can lead to dental caries and oral mucosal inflammation. In recent years, single-cell RNA sequencing (scRNA-seq) has been used to explore the heterogeneity and diversity of cells in various organs and tissues. However, the transcription profile of the human parotid gland at single-cell resolution has not been reported yet. In this study, we constructed the cell atlas of human parotid gland using the 10× Genomics platform. Characteristic gene analysis identified the biological functions of serous acinar cell populations in secreting digestive enzymes and antibacterial proteins. We revealed the specificity and similarity of the parotid gland compared to other digestive glands through comparative analyses of other published scRNA-seq data sets. We also identified the cell-specific expression of hub genes for Sjögren syndrome in the human parotid gland by integrating the results of genome-wide association studies and bulk RNA-seq, which highlighted the importance of immune cell dysfunction in parotid Sjögren syndrome pathogenesis.
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Atlas
Analysis Portals
Project Label
MappingParotidGlandSpecies
Homo sapiens
Sample Type
specimens
Anatomical Entity
parotid gland
Organ Part
Unspecified
Selected Cell Types
Unspecified
Disease Status (Specimen)
normal
Disease Status (Donor)
oral cavity squamous cell carcinoma
Development Stage
human adult stage
Library Construction Method
10x 3' v3
Nucleic Acid Source
single cell
Paired End
falseAnalysis Protocol
raw_matrix_generationFile Format
Cell Count Estimate
16.1kDonor Count
1