HCA Data Explorer

Healthy human kidney cell type single cell RNA-seq data

Access Granted
Updated October 11, 2023

The datasets contain single cell RNA sequencing data from healthy human kidneys. Samples were collected from healthy humans who were donating the kidney for the purpose of transplantation. Biopsies to obtain the samples were performed before the kidney was placed in the recipient to obtain cell states representative of the healthy donor.

Matthias KretzlerUniversity of Michigankretzler@med.umich.edu
Rajasree MenonUniversity of Michiganrajmenon@med.umich.edu
Kenneth Woodside1
Edgar Otto1
Abhijit Naik1
Jeff Hodgin1
Felix Eichinger1
Sean Eddy1
Matthias Kretzler1
Rajasree Menon1
1University of Michigan
None

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/94023a08-611d-4f22-a8c9-90956e091b2e
None
GEO Series Accessions:INSDC Study Accessions:

Atlas

None

Analysis Portals

None

Project Label

HealthyhumankidneycelltypesinglecellRNA-seqdata

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

kidney

Organ Part

cortex of kidney

Selected Cell Types

Unspecified

Disease Status (Specimen)

Unspecified

Disease Status (Donor)

Unspecified

Development Stage

15 development stages

Library Construction Method

10x 3' v3

Nucleic Acid Source

single cell

Paired End

false

File Format

fastq

Cell Count Estimate

156.6k

Donor Count

18
fastq186 file(s)