Organoids from human tooth showing epithelial stemness phenotype and differentiation potential

Access Granted
Updated July 28, 2025

Insight into human tooth epithelial stem cells and their biology is sparse. Tissue-derived organoid models typically replicate the tissue's epithelial stem cell compartment. Here, we developed a first-in-time epithelial organoid model starting from human tooth. Dental follicle (DF) tissue, isolated from unerupted wisdom teeth, efficiently generated epithelial organoids that were long-term expandable. The organoids displayed a tooth epithelial stemness phenotype similar to the DF's epithelial cell rests of Malassez (ERM), a compartment containing dental epithelial stem cells. Single-cell transcriptomics reinforced this organoid-ERM congruence, and uncovered novel, mouse-mirroring stem cell features. Exposure of the organoids to epidermal growth factor induced transient proliferation and eventual epithelial-mesenchymal transition, highly mimicking events taking place in the ERM in vivo. Moreover, the ERM stemness organoids were able to unfold an ameloblast differentiation process, further enhanced by transforming growth factor-β (TGFβ) and abrogated by TGFβ receptor inhibition, thereby reproducing TGFβ's known key position in amelogenesis. Interestingly, by creating a mesenchymal-epithelial composite organoid (assembloid) model, we demonstrated that the presence of dental mesenchymal cells (i.e. pulp stem cells) triggered ameloblast differentiation in the epithelial stem cells, thus replicating the known importance of mesenchyme-epithelium interaction in tooth development and amelogenesis. Also here, differentiation was abrogated by TGFβ receptor inhibition. Together, we developed novel organoid models empowering the exploration of human tooth epithelial stem cell biology and function as well as their interplay with dental mesenchyme, all at present only poorly defined in humans. Moreover, the new models may pave the way to future tooth-regenerative perspectives.

Hugo VankelecomLeuven Stem Cell Institute, KU Leuven (University of Leuven)hugo.vankelecom@kuleuven.be
Lara Hemeryck1
Florian Hermans1
Joel Chappell2
Hiroto Kobayashi3
Diether Lambrechts4
Ivo Lambrichts5
Annelies Bronckaers5
Hugo Vankelecom1
1Leuven Stem Cell Institute, KU Leuven (University of Leuven)
2Bit.bio
3Yamagata University
4VIB - Center for Cancer Biology
5Biomedical Research Institute (BIOMED); UHasselt (Hasselt University)
Ida Zucchi

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Atlas

Oral and CraniofacialORCF v1.0

Analysis Portals

None

Project Label

DentalFollicleHemeryck

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

tooth bud

Organ Part

dental follicle

Selected Cell Types

Unspecified

Disease Status (Specimen)

normal

Disease Status (Donor)

normal

Development Stage

adolescent stage

Library Construction Method

10x 3' v2

Nucleic Acid Source

single cell

Paired End

false

File Format

2 file formats

Cell Count Estimate

22.3k

Donor Count

2
fastq.gz12 file(s)xlsx1 file(s)