Decoding Human Megakaryocyte Development
Despite our growing understanding of embryonic immune development, rare early megakaryocytes (MKs) remain relatively understudied. Here we used single-cell RNA sequencing of human MKs from embryonic yolk sac (YS) and fetal liver (FL) to characterize the transcriptome, cellular heterogeneity, and developmental trajectories of early megakaryopoiesis. In the YS and FL, we found heterogeneous MK subpopulations with distinct developmental routes and patterns of gene expression that could reflect early functional specialization. Intriguingly, we identified a subpopulation of CD42b+CD14+ MKs in vivo that exhibit high expression of genes associated with immune responses and can also be derived from human embryonic stem cells (hESCs) in vitro. Furthermore, we identified THBS1 as an early marker for MK-biased embryonic endothelial cells. Overall, we provide important insights and invaluable resources for dissection of the molecular and cellular programs underlying early human megakaryopoiesis.
To reference this project, please use the following link:
Downloaded and exported data is governed by the HCA Data Release Policy and licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0). For more information please see our Data Use Agreement.
Atlas
Analysis Portals
NoneProject Label
MegakaryocyteDevelopmentSpecies
Homo sapiens
Sample Type
Anatomical Entity
Organ Part
inner cell mass
Selected Cell Types
Model Organ
bone marrow
Disease Status (Specimen)
normal
Disease Status (Donor)
normal
Development Stage
Library Construction Method
Nucleic Acid Source
single cell
Paired End
false, trueAnalysis Protocol
10x_analysis_protocolFile Format
Cell Count Estimate
18.7kDonor Count
12