A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation
The human brain undergoes protracted postnatal maturation, guided by dynamic changes in gene expression. Most studies exploring these processes have used bulk tissue analyses, which mask cell-type-specific gene expression dynamics. Here, using single-nucleus RNA sequencing on temporal lobe tissue, including samples of African ancestry, we build a joint pediatric and adult atlas of 75 cell subtypes, which we verify with spatial transcriptomics. We explore the differences between pediatric and adult cell subtypes, revealing the genes and pathways that change during brain maturation. Our results highlight excitatory neuron subtypes, including the LTK and FREM subtypes, that show elevated expression of genes associated with cognition and synaptic plasticity in pediatric tissue. The resources we present here improve our understanding of the brain during its development and contribute to global efforts to build an inclusive brain cell map.
A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation (Official HCA Publication)
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Atlas
Analysis Portals
Project Label
PaedAdultTemporalCortexSpecies
Homo sapiens
Sample Type
specimens
Anatomical Entity
brain
Organ Part
temporal lobe
Selected Cell Types
Unspecified
Disease Status (Specimen)
normal
Disease Status (Donor)
Development Stage
Library Construction Method
Nucleic Acid Source
Paired End
falseAnalysis Protocol
Seurat, cell2locationFile Format
Cell Count Estimate
144.4kDonor Count
8