Single-nucleus transcriptomic profiles of glial cells in human dorsal root ganglion and spinal cord
Glial cells are present throughout the entire nervous system and paly a crucial role in regulating physiological and pathological functions, such as infections, acute injuries and chronic neurodegenerative disorders. The glial cells mainly include astrocytes, microglia, and oligodendrocytes in the central nervous system (CNS), and satellite glial cells (SGCs) in the peripheral nervous system (PNS). Although the glial subtypes and functional heterogeneity is relatively well understood in mice by recent studies using single-cell or single-nucleus RNA-sequencing, no evidence yet has elucidate the transcriptomic profiles of glia cells in PNS and CNS. Here, we used high-throughput single-nucleus RNA-sequencing to map the cellular and functional heterogeneity of SGCs in human dorsal root ganglion (DRG), and astrocytes, microglia, and oligodendrocytes in human spinal cord. In addition, we compared the human findings with previous single-nucleus transcriptomic profiles of glial cells from mouse DRG and spinal cord. This work will comprehensively profile glial cells heterogeneity and will provide a powerful resource for probing the cellular basis of human physiological and pathological conditions related to glial cells. Overall design: Single-nucleus transcriptomic profiles of glial cells in DRG and spinal cord from 3 human donors
To reference this project, please use the following link:
Downloaded and exported data is governed by the HCA Data Release Policy and licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0). For more information please see our Data Use Agreement.
Atlas
Analysis Portals
Project Label
snRNAseqOfDrgAndSpinalCordGlialCellsSpecies
Homo sapiens
Sample Type
specimens
Anatomical Entity
spinal cord
Organ Part
Selected Cell Types
Unspecified
Disease Status (Specimen)
normal
Disease Status (Donor)
normal
Development Stage
human adult stage
Library Construction Method
10x 3' v3
Nucleic Acid Source
single nucleus
Paired End
falseAnalysis Protocol
analysis_protocol_1File Format
Cell Count Estimate
UnspecifiedDonor Count
3