HCA Data Explorer

Skin single cell universe identifies IL-1B/IL23A co-producing CD14+ type 3 dendritic cells in psoriasis

Access Granted
Updated September 15, 2022

Inflammatory skin diseases including atopic dermatitis (AD) and psoriasis (PSO) are underpinned by dendritic cell (DC)-mediated T cell responses. Currently, the heterogeneous human cutaneous DC population is incompletely characterized, and its contribution to these diseases remains unclear. Here, we performed index-sorted single-cell flow cytometry and RNA sequencing of lesional and nonlesional AD and PSO skin to identify macrophages and all DC subsets, including the newly described mature LAMP3+BIRC3+ DCs enriched in immunoregulatory molecules (mregDC) and CD14+ DC3. By integrating our indexed data with published skin datasets, we generated a myeloid cell universe of DC and macrophage subsets in healthy and diseased skin. Importantly, we found that CD14+ DC3s increased in PSO lesional skin and co-produced IL1B and IL23A, which are pathological in PSO. Our study comprehensively describes the molecular characteristics of macrophages and DC subsets in AD and PSO at single-cell resolution, and identifies CD14+ DC3s as potential promoters of inflammation in PSO.

Florent GinhouxSingapore Immunology Network (SIgN), A*STARFlorent_Ginhoux@immunol.a-star.edu.sg
Florent Ginhoux (Principal Investigator)1
1Singapore Immunology Network (SIgN), A*STAR
Brittney D Wick

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/b733dc1b-1d55-45e3-8036-7eab0821742c
None
GEO Series Accessions:

Atlas

None

Analysis Portals

None

Project Label

skinCellAnalysisPsoriasis

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

skin of body

Organ Part

skin of back

Selected Cell Types

2 cell types

Disease Status (Specimen)

2 disease statuses

Disease Status (Donor)

2 disease statuses

Development Stage

human adult stage

Library Construction Method

Smart-seq2

Nucleic Acid Source

single cell

Paired End

true

Analysis Protocol

analysis_protocol_1

File Format

3 file formats

Cell Count Estimate

1.6k

Donor Count

4
fastq.gz3,132 file(s)txt.gz1 file(s)xlsx1 file(s)