HCA Data Explorer

αβγδ T cells play a vital role in fetal human skin development and immunity

Access Granted
Updated October 17, 2023

T cells in human skin play an important role in the immune defense against pathogens and tumors. T cells are present already in fetal skin, where little is known about their cellular phenotype and biological function. Using single-cell analyses, we identified a naive T cell population expressing αβ and γδ T cell receptors (TCRs) that was enriched in fetal skin and intestine but not detected in other fetal organs and peripheral blood. TCR sequencing data revealed that double-positive (DP) αβγδ T cells displayed little overlap of CDR3 sequences with single-positive αβ T cells. Gene signatures, cytokine profiles and in silico receptor-ligand interaction studies indicate their contribution to early skin development. DP αβγδ T cells were phosphoantigen responsive, suggesting their participation in the protection of the fetus against pathogens in intrauterine infections. Together, our analyses unveil a unique cutaneous T cell type within the native skin microenvironment and point to fundamental differences in the immune surveillance between fetal and adult human skin.

Adelheid Elbe-BürgerMedical University of Viennaadelheid.elbe-buerger@meduniwien.ac.at
René Reitermaier1
Thomas Krausgruber2
Nikolaus Fortelny2
Tanya Ayub1
Pablo Augusto Vieyra-Garcia3
Philip Kienzl1
Peter Wolf3
Anke Scharrer1
Christian Fiala4
Marita Kölz1
Manuela Hiess1
Martin Vierhapper1
Christopher Schuster1
Andreas Spittler1
Christof Worda1
Wolfgang Weninger1
Christoph Bock2
Wolfgang Eppel1
Adelheid Elbe-Bürger1
1Medical University of Vienna
2Research Center for Molecular Medicine (CeMM) of the Austrian Academy of Sciences
3Medical University of Graz
4Gynmed Clinic
Ida Zucchi

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/cc35f94e-e93b-4dbd-a08c-702978d9046f
None
GEO Series Accessions:

Atlas

None

Analysis Portals

None

Project Label

FetalSkinDevImmune

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

skin of body

Organ Part

Unspecified

Selected Cell Types

2 cell types

Disease Status (Specimen)

normal

Disease Status (Donor)

normal

Development Stage

fetal stage

Library Construction Method

10x 3' v2

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

processed_matrix_generation, raw_matrix_generation

File Format

3 file formats

Cell Count Estimate

5.5k

Donor Count

3
h5.gz1 file(s)tsv.gz2 file(s)xlsx1 file(s)