HCA Data Explorer

The Dynamic Transcriptional Cell Atlas of Testis Development During Human Puberty

Access Granted
Updated January 6, 2025

The human testis undergoes dramatic developmental and structural changes during puberty, including proliferation and maturation of somatic niche cells, and the onset of spermatogenesis. To characterize this understudied process, we profiled and analyzed single-cell transcriptomes of ∼10,000 testicular cells from four boys spanning puberty and compared them to those of infants and adults. During puberty, undifferentiated spermatogonia sequentially expand and differentiate prior to the initiation of gametogenesis. Notably, we identify a common pre-pubertal progenitor for Leydig and myoid cells and delineate candidate factors controlling pubertal differentiation. Furthermore, pre-pubertal Sertoli cells exhibit two distinct transcriptional states differing in metabolic profiles before converging to an alternative single mature population during puberty. Roles for testosterone in Sertoli cell maturation, antimicrobial peptide secretion, and spermatogonial differentiation are further highlighted through single-cell analysis of testosterone-suppressed transfemale testes. Taken together, our transcriptional atlas of the developing human testis provides multiple insights into developmental changes and key factors accompanying male puberty.

Bradley R CairnsHoward Hughes Medical Institutebrad.cairns@hci.utah.edu
Jingtao Guo1
Xichen Nie1
Maria Giebler2
Hana Mlcochova2
Yueqi Wang3
Edward J Grow1
Robin Kim4
Melissa Tharmalingam5
Gabriele Matilionyte5
Cecilia Lindskog6
Douglas T Carrell7
Rod T Mitchell5
Anne Goriely2
James M Hotaling7
Bradley R Cairns1
1Howard Hughes Medical Institute
2Radcliffe Department of Medicine
3Department of Computer Science
4Section of Transplantation
5MRC Centre for Reproductive Health
6Department of Immunology
7The Andrology Laboratory
Enrique Sapena Ventura
Ida Zucchi

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/e579d0f4-18ef-4d42-90fa-4d2afb60a862

Supplementary links are provided by contributors and represent items such as additional data which can’t be hosted here; code that was used to analyze this data; or tools and visualizations associated with this specific dataset.

1.https://humantestisatlas.shinyapps.io/humantestisatlas1/
INSDC Project Accessions:GEO Series Accessions:INSDC Study Accessions:

Atlas

None

Analysis Portals

None

Project Label

TestisCellAtlas

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

testis

Organ Part

Unspecified

Selected Cell Types

Unspecified

Disease Status (Specimen)

normal

Disease Status (Donor)

normal

Development Stage

3 development stages

Library Construction Method

10x 3' v2

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

raw_matrix_generation

File Format

5 file formats

Cell Count Estimate

41.6k

Donor Count

6
fastq.gz24 file(s)jpeg4 file(s)jpg2 file(s)txt.gz2 file(s)xlsx1 file(s)
HCA Data PortalHCA Data Portal
AboutHelpPrivacyContact
v2.11.0-8473b9b-dcp46