Single-Cell Characterization of Malignant Phenotypes and Developmental Trajectories of Adrenal Neuroblastoma

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Updated May 22, 2025

Neuroblastoma (NB), which is a subtype of neural-crest-derived malignancy, is the most common extracranial solid tumor occurring in childhood. Despite extensive research, the underlying developmental origin of NB remains unclear. Using single-cell RNA sequencing, we generate transcriptomes of adrenal NB from 160,910 cells of 16 patients and transcriptomes of putative developmental cells of origin of NB from 12,103 cells of early human embryos and fetal adrenal glands at relatively late development stages. We find that most adrenal NB tumor cells transcriptionally mirror noradrenergic chromaffin cells. Malignant states also recapitulate the proliferation/differentiation status of chromaffin cells in the process of normal development. Our findings provide insight into developmental trajectories and cellular states underlying human initiation and progression of NB.

Rui DongChildren's Hospital of Fudan University; Shanghai Key Laboratory of Birth Defectsrdong@fudan.edu.cn
Kai LiChildren's Hospital of Fudan University; Shanghai Key Laboratory of Birth Defectslikai2727@163.com
Jia WangRenji-Med X Clinical Stem Cell Research Center; Ren Ji Hospital; Shanghai Jiao Tong Universitywj860520@163.com
Rui Dong1
Ran Yang1
Yong Zhan1
Hua-Dong Lai2
Chun-Jing Ye1
Xiao-Ying Yao3
Wen-Qin Luo4
Xiao-Mu Cheng2
Ju-Ju Miao2
Jun-Feng Wang1
Bai-Hui Liu1
Xiang-Qi Liu1
Lu-Lu Xie1
Yi Li1
Man Zhang2
Lian Chen5
Wei-Chen Song6
Wei Qian2
Wei-Qiang Gao7
Yun-Hui Tang3
Chun-Yan Shen3
Wei Jiang8
Gong Chen1
Wei Yao1
Kui-Ran Dong1
Xian-Min Xiao1
Shan Zheng1
Kai Li1
Jia Wang4
1Children's Hospital of Fudan University; Shanghai Key Laboratory of Birth Defects
2Med-X Research Institute; Shanghai Jiao Tong University
3Obstetrics and Gynecology Hospital of Fudan University
4Renji-Med X Clinical Stem Cell Research Center; Ren Ji Hospital; Shanghai Jiao Tong University
5Children's Hospital of Fudan University
6Shanghai Mental Health Center; Shanghai Jiao Tong University
7Shanghai Jiao Tong University; Renji-Med X Clinical Stem Cell Research Center; Ren Ji Hospital, School of Medicine
8Genergy Bio-technology (Shanghai) Co. Ltd
Ida Zucchi

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/e889ffc9-86f6-44f5-b684-dfce78e552a3
None
GEO Series Accessions:
INSDC Project Accessions:
INSDC Study Accessions:

Atlas

DevelopmentDevelopment v1.0

Analysis Portals

None

Project Label

DevelopmentalAdrenalNB

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

Adrenal gland

Organ Part

Unspecified

Selected Cell Types

Unspecified

Disease Status (Specimen)

2 disease statuses

Disease Status (Donor)

2 disease statuses

Development Stage

5 development stages

Library Construction Method

2 library construction methods

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

raw_matrix_generation

File Format

4 file formats

Cell Count Estimate

173.0k

Donor Count

22
csv.gz3 file(s)fastq.gz126 file(s)xls.gz22 file(s)xlsx1 file(s)
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